euL1db
The European database of L1-HS retrotransposon insertions in humans

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   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

162 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1801 chr1 75192898 75192898 - unknown germline . no 220 CRYZ
srip2477 chr1 95801850 95801850 - unknown germline . no 220 .
srip2539 chr1 98363717 98363717 - unknown germline . no 220 DPYD
srip3056 chr1 102568916 102568916 + unknown germline . no 220 .
srip4121 chr1 149308428 149308428 + unknown germline . no 220 LOC645262
srip5050 chr1 169524865 169524865 + unknown germline . no 220 F5
srip6237 chr1 194934643 194934643 . unknown germline . no 220 .
srip6991 chr1 225272510 225272510 + unknown germline . no 220 DNAH14
srip7213 chr1 237449858 237449858 . unknown germline . no 220 RYR2
srip7828 chr10 19065791 19065791 - unknown germline . no 220 .
srip7849 chr10 19211098 19211098 . unknown germline . no 220 .
srip8476 chr10 25707693 25707693 - unknown germline . no 220 GPR158
srip9535 chr10 68803690 68803690 + unknown germline . no 220 LRRTM3;CTNNA3
srip9801 chr10 82972200 82972200 . unknown germline . no 220 .
srip10587 chr10 91717638 91717638 - unknown germline . no 220 .
srip12539 chr11 15380252 15380252 + unknown germline . no 220 .
srip13807 chr11 33670130 33670130 + unknown germline . no 220 C11orf41
srip14240 chr11 41831803 41831803 - unknown germline . no 220 .
srip15368 chr11 58171843 58171843 + unknown germline . no 220 .
srip16476 chr11 83313943 83313943 - unknown germline . no 220 DLG2
srip16526 chr11 83652358 83652358 - unknown germline . no 220 DLG2
srip17174 chr11 94684368 94684368 + unknown germline . no 220 .
srip18343 chr11 121131527 121131527 . unknown germline . no 220 .
srip19282 chr11 134305645 134305645 - unknown germline . no 220 .
srip19901 chr12 11219195 11219195 - unknown germline . no 220 PRH1-PRR4
srip20143 chr12 12933687 12933687 - unknown germline . no 220 APOLD1
srip20738 chr12 28226420 28226420 - unknown germline . no 220 .
srip22826 chr12 48929057 48929057 + unknown germline . no 220 .
srip24625 chr12 84965140 84965140 + unknown germline . no 220 .
srip25101 chr12 95808453 95808453 - unknown germline . no 220 .
srip26079 chr12 118186932 118186932 + unknown germline . no 220 KSR2
srip30586 chr13 78055084 78055084 + unknown germline . no 220 .
srip30961 chr13 79259790 79259790 - unknown germline . no 220 .
srip31559 chr13 85871605 85871605 - unknown germline . no 220 .
srip31991 chr13 86340151 86340151 - unknown germline . no 220 .
srip33520 chr13 104296230 104296230 - unknown germline . no 220 .
srip35219 chr14 28301256 28301256 + unknown germline . no 220 .
srip35887 chr14 36674754 36674754 + unknown germline . no 220 .
srip38638 chr14 86381803 86381803 - unknown germline . no 220 .
srip39066 chr15 22574170 22574170 + unknown germline . no 220 .
srip39522 chr15 34031845 34031845 - unknown germline . no 220 RYR3
srip40223 chr15 47507335 47507335 - unknown germline . no 220 SEMA6D
srip43244 chr15 100931152 100931152 - unknown germline . no 220 .
srip44086 chr16 17755306 17755306 - unknown germline . no 220 .
srip45220 chr16 33923141 33923141 . unknown germline . no 220 LOC348210
srip45500 chr16 33992437 33992437 . unknown germline . no 220 .
srip46521 chr17 4314989 4314989 - unknown germline . no 220 .
srip46536 chr17 6341639 6341639 - unknown germline . no 220 .
srip47014 chr17 25303557 25303557 + unknown germline . no 220 .
srip47198 chr17 28398310 28398310 + unknown germline . no 220 EFCAB5
srip47689 chr17 32813618 32813618 + unknown germline . no 220 .
srip48967 chr18 15095255 15095255 - unknown germline . no 220 .
srip49009 chr18 20160971 20160971 + unknown germline . no 220 .
srip49166 chr18 27219191 27219191 - unknown germline . no 220 .
srip50021 chr18 49216225 49216225 - unknown germline . no 220 .
srip50754 chr18 51762737 51762737 - unknown germline . no 220 .
srip51610 chr18 74515281 74515281 - unknown germline . no 220 LOC100131655
srip53458 chr2 23191008 23191008 - unknown germline . no 220 .
srip54646 chr2 42051410 42051410 + unknown germline . no 220 .
srip55710 chr2 78992036 78992036 - unknown germline . no 220 .
srip58563 chr2 144010786 144010786 + unknown germline . no 220 ARHGAP15
srip59194 chr2 147020925 147020925 + unknown germline . no 220 .
srip59612 chr2 156527831 156527831 + unknown germline . no 220 .
srip60782 chr2 191478707 191478707 - unknown germline . no 220 .
srip61370 chr2 206147275 206147275 + unknown germline . no 220 PARD3B
srip62627 chr2 235519802 235519802 + unknown germline . no 220 .
srip64032 chr20 25895497 25895497 - unknown germline . no 220 .
srip64069 chr20 25903875 25903875 - unknown germline . no 220 .
srip64155 chr20 29591810 29591810 . unknown germline . no 220 .
srip64782 chr20 41952105 41952105 - unknown germline . no 220 .
srip65430 chr21 11106662 11106662 - unknown germline . no 220 .
srip65545 chr21 14390190 14390190 - unknown germline . no 220 .
srip65860 chr21 19517305 19517305 - unknown germline . no 220 .
srip66916 chr21 29069178 29069178 + unknown germline . no 220 .
srip67500 chr22 22486374 22486374 - unknown germline . no 220 IGL@
srip67853 chr22 22715595 22715595 + unknown germline . no 220 IGL@
srip68757 chr22 44324597 44324597 - unknown germline . no 220 PNPLA3
srip70732 chr3 24987866 24987866 - unknown germline . no 220 .
srip72030 chr3 43262676 43262676 + unknown germline . no 220 .
srip72709 chr3 55788574 55788574 + unknown germline . no 220 ERC2
srip72781 chr3 56642622 56642622 . unknown germline . no 220 CCDC66
srip73382 chr3 59852896 59852896 + unknown germline . no 220 FHIT
srip74024 chr3 79216304 79216304 + unknown germline . no 220 ROBO1
srip74860 chr3 82144861 82144861 - unknown germline . no 220 .
srip75079 chr3 84433390 84433390 + unknown germline . no 220 .
srip75283 chr3 84593281 84593281 - unknown germline . no 220 .
srip75580 chr3 85576556 85576556 + unknown germline . no 220 CADM2
srip77250 chr3 123590719 123590719 + unknown germline . no 220 MYLK
srip78159 chr3 143121766 143121766 - unknown germline . no 220 SLC9A9
srip78283 chr3 144610075 144610075 - unknown germline . no 220 .
srip78645 chr3 151148549 151148549 - unknown germline . no 220 MED12L
srip80081 chr3 175677893 175677893 - unknown germline . no 220 .
srip80345 chr3 176091325 176091325 + unknown germline . no 220 .
srip80854 chr3 181192836 181192836 + unknown germline . no 220 .
srip81478 chr3 186372132 186372132 + unknown germline . no 220 .
srip82115 chr3 193354172 193354172 - unknown germline . no 220 OPA1
srip82357 chr4 9451067 9451067 . unknown germline . no 220 DEFB131
srip82977 chr4 18162684 18162684 - unknown germline . no 220 .
srip84868 chr4 47007790 47007790 - unknown germline . no 220 .
srip85757 chr4 58917520 58917520 - unknown germline . no 220 .
srip86172 chr4 66413931 66413931 + unknown germline . no 220 EPHA5
srip86338 chr4 66809073 66809073 - unknown germline . no 220 .
srip88373 chr4 101264122 101264122 + unknown germline . no 220 .
srip88903 chr4 103343751 103343751 + unknown germline . no 220 .
srip89966 chr4 112628966 112628966 + unknown germline . no 220 .
srip90862 chr4 121137439 121137439 . unknown germline . no 220 .
srip91261 chr4 130361660 130361660 - unknown germline . no 220 .
srip91596 chr4 132181655 132181655 - unknown germline . no 220 .
srip92202 chr4 134596423 134596423 + unknown germline . no 220 .
srip93720 chr4 155630014 155630014 + unknown germline . no 220 .
srip94408 chr4 169413104 169413104 - unknown germline . no 220 .
srip95378 chr4 190659701 190659701 + unknown germline . no 220 .
srip96065 chr5 8749521 8749521 + unknown germline . no 220 .
srip97226 chr5 26093147 26093147 + unknown germline . no 220 .
srip97730 chr5 33633341 33633341 - unknown germline . no 220 ADAMTS12
srip100712 chr5 89450774 89450774 + unknown germline . no 220 .
srip103350 chr5 125040043 125040043 + unknown germline . no 220 .
srip104213 chr5 144331004 144331004 - unknown germline . no 220 .
srip104852 chr5 154873935 154873935 - unknown germline . no 220 .
srip108168 chr6 39219886 39219886 . unknown germline . no 220 .
srip108697 chr6 46310298 46310298 + unknown germline . no 220 .
srip109123 chr6 57494221 57494221 - unknown germline . no 220 PRIM2
srip110906 chr6 77980644 77980644 - unknown germline . no 220 .
srip112040 chr6 91669514 91669514 - unknown germline . no 220 .
srip112708 chr6 102283763 102283763 - unknown germline . no 220 GRIK2
srip113627 chr6 140318268 140318268 - unknown germline . no 220 .
srip114762 chr6 148195798 148195798 + unknown germline . no 220 .
srip115702 chr6 162181263 162181263 + unknown germline . no 220 PARK2
srip116290 chr7 17094707 17094707 + unknown germline . no 220 .
srip116621 chr7 27307051 27307051 . unknown germline . no 220 .
srip117464 chr7 52789459 52789459 + unknown germline . no 220 .
srip117627 chr7 53652509 53652509 - unknown germline . no 220 .
srip117919 chr7 58011350 58011350 + unknown germline . no 220 .
srip118290 chr7 62492938 62492938 + unknown germline . no 220 .
srip118886 chr7 70188682 70188682 - unknown germline . no 220 AUTS2
srip119815 chr7 84901724 84901724 - unknown germline . no 220 .
srip120411 chr7 88516552 88516552 - unknown germline . no 220 ZNF804B
srip121731 chr7 107829256 107829256 + unknown germline . no 220 NRCAM
srip122011 chr7 108325669 108325669 . unknown germline . no 220 .
srip122030 chr7 108576125 108576125 + unknown germline . no 220 .
srip124078 chr8 4452901 4452901 - unknown germline . no 220 CSMD1
srip124372 chr8 5829282 5829282 - unknown germline . no 220 .
srip126443 chr8 62115152 62115152 + unknown germline . no 220 NPM1P6
srip126887 chr8 67381884 67381884 - unknown germline . no 220 .
srip127433 chr8 72399228 72399228 - unknown germline . no 220 .
srip128276 chr8 87315042 87315042 + unknown germline . no 220 .
srip129131 chr8 115788572 115788572 - unknown germline . no 220 .
srip129408 chr8 115881775 115881775 + unknown germline . no 220 .
srip131091 chr9 6290487 6290487 + unknown germline . no 220 .
srip131366 chr9 7741401 7741401 + unknown germline . no 220 .
srip133410 chr9 32463891 32463891 - unknown germline . no 220 DDX58
srip133643 chr9 34904794 34904794 - unknown germline . no 220 .
srip133754 chr9 66454903 66454903 . unknown germline . no 220 .
srip133869 chr9 68494259 68494259 - unknown germline . no 220 .
srip133877 chr9 69074551 69074551 - unknown germline . no 220 LOC100507370
srip135893 chr9 118083876 118083876 - unknown germline . no 220 DEC1
srip137239 chrX 54917144 54917144 + unknown germline . no 220 .
srip137817 chrX 61894855 61894855 . unknown germline . no 220 .
srip139276 chrX 84009827 84009827 . unknown germline . no 220 TEX16P
srip139759 chrX 98264293 98264293 - unknown germline . no 220 .
srip141052 chrX 122664863 122664863 - unknown germline . no 220 .
srip141373 chrX 129525275 129525275 - unknown germline . no 220 .